Clarity LIMS
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Illumina Connected Software
  • Announcements
    • Announcements
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  • API and Database
    • API Portal
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      • Application Examples
        • Python API Library (glsapiutil.py) Location
        • Scripts That Help Automate Steps
        • Scripts That Validate Step Contents
        • Scripts Triggered Outside of Workflows/Steps
        • Miscellaneous Scripts
          • Illumina LIMS Integration
          • Generating a Hierarchical Sample History
          • Protocol-based Permissions
          • Self-Incremental Counters
          • Generic CSV Parser Template (Python)
          • Renaming Samples to Add an Internal ID
          • Creating Custom Sample Sheets
          • Copying Output UDFs to Submitted Samples
          • Parsing Sequencing Meta-Data into Clarity LIMS
          • Submit to a Compute Cluster via PBS
          • Downloading a File and PDF Image Extraction
        • Resources and References
  • Illumina Preset Protocols
    • IPP v2.10
    • IPP v2.9
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  • Sample Prep
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  • iLASS & Infinium Arrays
    • iLASS
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  • Applications
    • IGA
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  • Instruments & Integrations
    • Compatibility
    • Integration Properties
    • Clarity LIMS Product Analytics
    • Illumina Run Manager
    • iScan
    • iSeq 100 Run Setup v1.0
    • MiniSeq v1.0
    • MiSeq
    • MiSeq i100 (On-Prem)
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    • References
  • Integration Toolkits
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  • Known Issues
    • Integration
  • Resources
    • Third Party Software Information
  • Others
    • Revision History
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  1. API and Database
  2. API Portal
  3. Application Examples

Miscellaneous Scripts

  • Illumina LIMS Integration

  • Generating a Hierarchical Sample History

  • Protocol-based Permissions

  • Self-Incremental Counters

  • Generic CSV Parser Template (Python)

  • Renaming Samples to Add an Internal ID

  • Creating Custom Sample Sheets

  • Copying Output UDFs to Submitted Samples

  • Parsing Sequencing Meta-Data into Clarity LIMS

  • Submit to a Compute Cluster via PBS

  • Downloading a File and PDF Image Extraction

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Last updated 1 year ago

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