# Release Notes

Release Date: April 2026

Document Version: 3

These release notes describe the key changes to software components for the Clarity LIMS NextSeq 1000/2000 Integration Package v2.6.0.

## Compatibility

Refer to [Compatibility](/instruments-and-integrations/compatibility.md#nextseq-1000-2000) under Instruments & Integrations.

## New Features

* Merge Reads PF and %PF for Read 1 and Read 2
* Replace density metric with occupancy metric
* Analysis workflow UDF default changed from Generate FastQ to BCL convert

## Defect Repairs

* When handling run events, start automated steps using master step name instead of protocol step name.
* Bug fixes for log file to reflect actual results
* Clean up unused custom primer UDF
* Accept underscore and hyphen for sample name in sample sheet

## Known Issues

* Sequencing run error triggered by disk space full on instrument causes *RunParameters.xml* to be empty and the run event cannot be processed on Clarity LIMS. This error is unlikely to occur as pre-run checks on the instrument check for sufficient disk space before run is started.

## Revision History

| **Version** | **Changes**                                                                              |
| ----------- | ---------------------------------------------------------------------------------------- |
| 3           | <ul><li>Updated Compatibility section to reference Compatibility matrix table.</li></ul> |
| 2           | <ul><li>Updated Compatibility section to reference Compatibility matrix table.</li></ul> |
| 1           | <ul><li>Initial release.</li></ul>                                                       |


---

# Agent Instructions: Querying This Documentation

If you need additional information that is not directly available in this page, you can query the documentation dynamically by asking a question.

Perform an HTTP GET request on the current page URL with the `ask` query parameter:

```
GET https://help.claritylims.illumina.com/instruments-and-integrations/nextseq1k2k/nextseq1k2k-v2.6.0/nextseq1k2k-v2.6.0-release-notes.md?ask=<question>
```

The question should be specific, self-contained, and written in natural language.
The response will contain a direct answer to the question and relevant excerpts and sources from the documentation.

Use this mechanism when the answer is not explicitly present in the current page, you need clarification or additional context, or you want to retrieve related documentation sections.
