Installation
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The Illumina NovaSeq X Series On-Prem Integration Package v1.1.0 supports the integration of Clarity LIMS to NovaSeq X Series instruments that are on-premise via Illumina Run Manager. Refer to NovaSeq X Series On-Prem Integration v1.1.0 User Interaction, Validation and Troubleshooting on prerequisites for installation.
Steps:
Install / Upgrade Clarity LIMS
Install and Configure Illumina Run Manager Integration Service
Install NovaSeq X Series On-Prem Integration RPM
Install Illumina Preset Protocols (IPP) v2.12 RPM and Import Required IPP Workflows.
Install or upgrade to Clarity LIMS v6.2 or later. If you are using an older version of Clarity LIMS, please contact Illumina Support (techsupport@illumina.com) to schedule for upgrade.
Install and configure Illumina Run Manager Integration Service v1.1.0, please refer to Illumina Run Manager v1.1.0 Installation for details.
Install ClarityLIMS-NovaSeqXSeries-OnPremise RPM using yum or your preferred package manager.
Example with YUM:
Example with RPM:
Install BaseSpaceLIMS-Illumina-Preset-Protocols RPM using yum or your preferred package manager.
Example with YUM:
Example with RPM:
Upon successful installation of IPP v2.12.0, install the following workflow configurations:
NovaSeq X Series On-Prem Sequencing v2.0 workflow
(Optional) Library Prep Validation v2.3.7 workflow
For detailed options and steps on how to install IPP workflows and protocols, see Installer Parameters and Operations section of Illumina Preset Protocols v2.12 Installation and User Configuration.
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yum install ClarityLIMS-NovaSeqXSeries-OnPremiserpm -i ClarityLIMS-NovaSeqXSeries-OnPremise-{version}.86_64.rpmyum install BaseSpaceLIMS-Illumina-Preset-Protocolsrpm -i BaseSpaceLIMS-Illumina-Preset-Protocols-{version}.86_64.rpm