> For the complete documentation index, see [llms.txt](https://help.claritylims.illumina.com/llms.txt). Markdown versions of documentation pages are available by appending `.md` to page URLs; this page is available as [Markdown](https://help.claritylims.illumina.com/instruments-and-integrations/other-release-notes/miseq-v6.0.0-release-notes.md).

# MiSeq v6.0.0

## Overview: Workflow and Instrument Integrations for Illumina MiSeq 6.0

* Updated configurable SampleSheet generation SampleSheet generation is now done using the updated Template File Generator tool, which enables updates of the provided template for SampleSheet generation in order to add additional headers and columns.
  * Template provided with accompanying configuration generates the MiSeq SampleSheet.
  * When a new custom template is created, it can be uploaded using the Template File Management feature introduced in BaseSpace Clarity LIMS 5.1.
* New delivery mechanism for MiSeq Integration workflow configuration MiSeq Workflow configuration now delivered using a robust, Preconfigured Workflow Package installer.
  * Install history is recorded with version and install date information for better tracking and troubleshooting of installation.
* Simplified Library Prep step for validationSingle step mock library prep protocol included with configuration to facilitate quick validation of installed MiSeq 6.0 Sequencing Protocol.
* Supports MiSeq with Local Run ManagerSupport added in this release, to work with Local Run Manager (LRM) connected MiSeq Control Software.

## Bugs resolved in this release:

* Updated the Sequencing Interops Metrics parser to record more accurate metrics using the same parsing libraries as the instrument and SAV.
* Resolved a bug that was causing the Run Reports not attaching to MiSeq integration.
* Fixes of various internal automated test issues including smoketests.


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