MiSeqDx v1.0.0

Release Date: June 30, 2016

Version: 1.0

Compatibility: BaseSpace Clarity LIMS v4.1 or later; NGS Extensions Package v5.10 or later

Illumina MiSeqDx Software Compatibility:

• MiSeq Operating Software (MOS) v1.1.7

• MiSeq Reporter Software (MRS) v2.2.31.1

Features to note for this release

New features

• Functionality to generate sample sheet for CF Clinical Sequencing Assay, CF 139-Variant Assay, and Universal Kit.

• Functionality to support Diagnostic mode only.

• PhiX control may be added to the run and sample sheet can be generated.

• Automation to support bcl2fastq v2.17 sample sheet generation for downstream analysis.

Defects fixed

Not applicable

Known limitations

The following are known limitations. These are prioritized for a future release:

• Sample sheet generation does not support including positive and/or negative controls in a sequencing run.

Known issues

The following are known defects. These are prioritized for a future release:

• The documentation for bcl2fastq2 sample sheet generation contains some inconsistent column and incorrect entity information.