> For the complete documentation index, see [llms.txt](https://help.claritylims.illumina.com/llms.txt). Markdown versions of documentation pages are available by appending `.md` to page URLs; this page is available as [Markdown](https://help.claritylims.illumina.com/instruments-and-integrations/other-release-notes/nextseq550-v2.0.3-release-notes.md).

# NextSeq 500/550 v2.0.3

## Compatibility:

* BaseSpace Clarity LIMS v4.2 to v5.x
* NGS Extensions Package v5.17 or later
* Preconfigured Workflows Package (PCWP) v1.x

## Illumina NextSeq Software Compatibility:

* NextSeq Control Software (NCS) v4.0
* This integration only supports Standalone mode on NCS v4.0.

## Features to note for this release

This release includes the following:

* Support for NextSeq Control Software (NCS) v4.0. The NextSeq batch file (gls\_event\_ncs\_rta.bat) updated to pull the sequencing run output folder network path from the RunParameter.xml file, as NCS v4.0 no longer outputs the path as a string.

## Issues resolved in this release

The following issues were resolved in this release:

* Incomplete content in Runreport.pdf
* Incorrect FinishDate in EndRun event file


---

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