> For the complete documentation index, see [llms.txt](https://help.claritylims.illumina.com/llms.txt). Markdown versions of documentation pages are available by appending `.md` to page URLs; this page is available as [Markdown](https://help.claritylims.illumina.com/instruments-and-integrations/other-release-notes/novaseq6k-api-v3.5.0-release-notes.md).

# NovaSeq 6000 API-based v3.5.0

These release notes describe the key changes to software components for the Clarity LIMS NovaSeq 6000 Integration Package.

## Compatibility

This version of the integration package is compatible with the following software:

* Clarity LIMS v5.1 and later
* NGS Extensions Package v5.22 and later
* Illumina Preset Protocols (IPP) v2.4.0 and later
* NovaSeq Control Software (NVCS) v1.8.0
* Illumina bcl2fastq v2.20

## New Features

Features provided with this release of the integration package are as follows.

* Fixes the following vulnerabilities:
  * Code injection (CVE-2022-42889)
  * Buffer management errors (CVE-2020-36518, CVE-2022-38752, CVE-2022-38751, CVE-2022-38749)
  * Resource exhaustion (CVE-2022-42003, CVE-2022-42004)
  * Uncontrolled resource consumption (CVE-2022-25857)

## Defects Fixed

Fixed the Validate Library Tube and Validate Flowcell Barcode automation scripts to accept only barcodes that are uppercased in the NovaSeq 6000 workflow.

## Known Issues

None


---

# Agent Instructions
This documentation is published with GitBook. GitBook is the documentation platform designed so that both humans and AI agents can read, navigate, and reason over technical content effectively. Learn more at gitbook.com.

## Querying This Documentation
If you need additional information that is not directly available in this page, you can query the documentation dynamically by asking a question.

Perform an HTTP GET request on the current page URL with the `ask` query parameter, and the optional `goal` query parameter:

```
GET https://help.claritylims.illumina.com/instruments-and-integrations/other-release-notes/novaseq6k-api-v3.5.0-release-notes.md?ask=<question>&goal=<endgoal>
```

`ask` is the immediate question: it should be specific, self-contained, and written in natural language.
`goal` is optional and describes the broader end goal you are ultimately trying to accomplish on behalf of the user. GitBook uses it to tailor the answer towards what is most useful for that goal.

The response will contain a direct answer to the question and relevant excerpts and sources from the documentation.

Use this mechanism when the answer is not explicitly present in the current page, you need clarification or additional context, or you want to retrieve related documentation sections.
