Derived Sample Automation Tokens
When configuring automations in the BaseSpace Clarity LIMS, copy tokens from the Tokens list and paste them into the Command-Line field.
These tokens are available for use in derived sample automations. If using multiple variables, add a space between each entry. All tokens and parameters are case-sensitive.
{username}
Supplies the username being configured in client.properties for the Automation Worker running the automation.
cmd /c "C:\ai\ai.bat {username}"
resolves to:
cmd /c C:\ai\ai.bat apiuser
{password}
Supplies the password of the username being configured in client.properties for the Automation Worker running the automation.
cmd /c "C:\ai\ai.bat {password}"
resolves to:
cmd /c C:\ai\ai.bat 3BlindMice
In log files, the password supplied on the command line is replaced with a series of *** characters.
{baseURI}
Supplies the base API URI to the triggered automation script.
cmd /c "C:\ai\ai.bat {baseURI}"
resolves to:
cmd /c C:\ai\ai.bat https://lims.lan.29/api
{derivedSampleLuids}
Supplies the derived sample LIMS IDs to the triggered automation script.
cmd /c "C:\ai\ai.bat {derivedSampleLuids}"
resolves to:
cmd /c C:\ai\ai.bat 2-1641 2-1642 2-1643
{userinput:customParameterName}
Allows for data input to supply the triggered automation script. Custom parameters are identified with the prefix 'userinput:'
The following command line requires the user to input a value for 'more_yield':
yieldscript.sh -y {userinput:more_yield} -u {username}
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